Package: btergm 1.10.12
btergm: Temporal Exponential Random Graph Models by Bootstrapped Pseudolikelihood
Temporal Exponential Random Graph Models (TERGM) estimated by maximum pseudolikelihood with bootstrapped confidence intervals or Markov Chain Monte Carlo maximum likelihood. Goodness of fit assessment for ERGMs, TERGMs, and SAOMs. Micro-level interpretation of ERGMs and TERGMs. The methods are described in Leifeld, Cranmer and Desmarais (2018), JStatSoft <doi:10.18637/jss.v083.i06>.
Authors:
btergm_1.10.12.tar.gz
btergm_1.10.12.zip(r-4.5)btergm_1.10.12.zip(r-4.4)btergm_1.10.12.zip(r-4.3)
btergm_1.10.12.tgz(r-4.4-any)btergm_1.10.12.tgz(r-4.3-any)
btergm_1.10.12.tar.gz(r-4.5-noble)btergm_1.10.12.tar.gz(r-4.4-noble)
btergm_1.10.12.tgz(r-4.4-emscripten)btergm_1.10.12.tgz(r-4.3-emscripten)
btergm.pdf |btergm.html✨
btergm/json (API)
| # Install 'btergm' in R: |
| install.packages('btergm', repos = c('https://leifeld.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/leifeld/btergm/issues
- LSP - Longitudinal international defense alliance network, 1981-2000
- advice - Longitudinal classroom friendship network and behavior
- alcohol - Longitudinal classroom friendship network and behavior
- allyNet - Longitudinal international defense alliance network, 1981-2000
- ch_coaut - Swiss political science co-authorship network 2013
- ch_dist100km - Swiss political science co-authorship network 2013
- ch_en_article_sim - Swiss political science co-authorship network 2013
- ch_nodeattr - Swiss political science co-authorship network 2013
- ch_topicsim - Swiss political science co-authorship network 2013
- committee - German Toxic Chemicals Policy Network in the 1980s
- contigMat - Longitudinal international defense alliance network, 1981-2000
- delinquency - Longitudinal classroom friendship network and behavior
- demographics - Longitudinal classroom friendship network and behavior
- friendship - Longitudinal classroom friendship network and behavior
- infrep - German Toxic Chemicals Policy Network in the 1980s
- intpos - German Toxic Chemicals Policy Network in the 1980s
- lNet - Longitudinal international defense alliance network, 1981-2000
- pol - German Toxic Chemicals Policy Network in the 1980s
- primary - Longitudinal classroom friendship network and behavior
- scifrom - German Toxic Chemicals Policy Network in the 1980s
- scito - German Toxic Chemicals Policy Network in the 1980s
- types - German Toxic Chemicals Policy Network in the 1980s
- warNet - Longitudinal international defense alliance network, 1981-2000
complex-networksdynamic-analysisergmestimationgoodness-of-fitinferencelongitudinal-datanetwork-analysispredictiontergm
Last updated 6 months agofrom:09b773804b. Checks:OK: 1 NOTE: 6. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Aug 28 2024 |
| R-4.5-win | NOTE | Aug 28 2024 |
| R-4.5-linux | NOTE | Aug 28 2024 |
| R-4.4-win | NOTE | Aug 28 2024 |
| R-4.4-mac | NOTE | Aug 28 2024 |
| R-4.3-win | NOTE | Aug 28 2024 |
| R-4.3-mac | NOTE | Aug 28 2024 |
Exports:adjustb1degb1starb2degb2starbtergmbtergm.secheckdegeneracycoefcomembconfintcreateGOFdegdspedgebetweenness.modularityedgebetweenness.predgebetweenness.rocedgeprobespfastgreedy.modularityfastgreedy.prfastgreedy.rocgeodesicgetformulagofhandleMissingsideginterpretistarkcyclekstarlouvain.modularitylouvain.prlouvain.rocmarginalplotmaxmod.modularitymaxmod.prmaxmod.rocmtergmnobsnspodegostarrocprshowspinglass.modularityspinglass.prspinglass.rocsummarytbergmtergmpreparetimecovtimesteps.btergmtimesteps.mtergmtimesteps.tbergmtriad.directedtriad.undirectedwalktrap.modularitywalktrap.prwalktrap.roc
Dependencies:bitopsbootcachemcaToolsclicodacpp11DEoptimRergmevaluatefansifastmapgluegplotsgtoolshighrigraphKernSmoothknitrlatticelifecyclelpSolveAPImagrittrMASSMatrixmemoisenetworkpillarpkgconfigpurrrrbibutilsRdpackrlangrlerobustbaseROCRsnastatnet.commonstringistringrtibbletrustutf8vctrsxfunyaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Temporal Exponential Random Graph Models by Bootstrapped Pseudolikelihood | btergm-package |
| Adjust the dimensions of a source object to the dimensions of a target object | adjust |
| Longitudinal international defense alliance network, 1981-2000 | alliances allyNet contigMat lNet LSP warNet |
| Estimate a TERGM by MPLE with temporal bootstrapping | btergm |
| An S4 class to represent a fitted TERGM by bootstrapped MPLE | btergm-class btergm.se coef,btergm-method confint,btergm-method nobs,btergm-method show,btergm-method summary,btergm-method timesteps.btergm |
| Check for degeneracy in fitted TERGMs | checkdegeneracy checkdegeneracy,btergm-method checkdegeneracy,mtergm-method checkdegeneracy-methods plot.degeneracy print.degeneracy |
| German Toxic Chemicals Policy Network in the 1980s (Volker Schneider) | chemnet committee infrep intpos pol scifrom scito types |
| Swiss political science co-authorship network 2013 | ch_coaut ch_coauthor ch_dist100km ch_en_article_sim ch_nodeattr ch_topicsim coauthor |
| Constructor for btergm objects | createBtergm |
| Constructor for mtergm objects | createMtergm |
| Constructor for tbergm objects | createTbergm |
| Create all predicted tie probabilities using MPLE | edgeprob |
| Extract the formula from a model | getformula getformula,btergm-method getformula,ergm-method getformula,mtergm-method getformula,tbergm-method getformula-methods |
| Goodness-of-fit diagnostics for ERGMs, TERGMs, SAOMs, and logit models | createGOF gof gof,btergm-method gof,ergm-method gof,matrix-method gof,mtergm-method gof,network-method gof,sienaFit-method gof,tbergm-method gof-methods gofmethods |
| Plot and print methods for GOF output | gof-plot gofplot plot,boxplot-method plot,gof-method plot,pr-method plot,roc-method plot,rocpr-method plot,univariate-method plot-gof plot.boxplot plot.gof plot.pr plot.roc plot.rocpr plot.univariate plotgof print,boxplot-method print,gof-method print,pr-method print,roc-method print,rocpr-method print,univariate-method print.boxplot print.gof print.pr print.roc print.rocpr print.univariate |
| Statistics for goodness-of-fit assessment of network models | b1deg b1star b2deg b2star comemb deg dsp edgebetweenness.modularity edgebetweenness.pr edgebetweenness.roc esp fastgreedy.modularity fastgreedy.pr fastgreedy.roc geodesic gof-statistics gofstatistics ideg istar kcycle kstar louvain.modularity louvain.pr louvain.roc maxmod.modularity maxmod.pr maxmod.roc nsp odeg ostar rocpr spinglass.modularity spinglass.pr spinglass.roc triad.directed triad.undirected walktrap.modularity walktrap.pr walktrap.roc |
| Handle missing data in matrices | handleMissings |
| Micro-Level Interpretation of (T)ERGMs | interpret interpret,btergm-method interpret,ergm-method interpret,mtergm-method interpret-methods |
| Longitudinal classroom friendship network and behavior (Andrea Knecht) | advice alcohol delinquency demographics friendship knecht primary |
| Plot marginal effects for two-way interactions in (T)ERGMs | marginalplot |
| Estimate a TERGM by MCMC-MLE | mtergm |
| An S4 Class to represent a fitted TERGM by MCMC-MLE | coef,mtergm-method mtergm-class nobs,mtergm-method show,mtergm-method summary,mtergm-method timesteps.mtergm |
| Simulate Networks from a 'btergm' Object | simulate.btergm simulate.mtergm |
| Estimate a TERGM using Bayesian estimation | tbergm |
| An S4 class to represent a fitted TERGM using Bayesian estimation | nobs,tbergm-method show,tbergm-method summary,tbergm-method tbergm-class timesteps.tbergm |
| Temporal dependencies for TERGMs | delrecip memory tergm-terms timecov |
| Prepare data structure for TERGM estimation, including composition change | tergmprepare |
